Job Description P37649 Confidence 99.91% Date Thu Jan 5 11:56:21 GMT 2012 Rank 21 Aligned Residues 151 % Identity 20% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		E	Q	N	E	N	A	M	R	F	P	V	S	D	L	P	N	K	A	L	L	M	E	M	L	E	Q	V	V	A	R	.	.	.	.	K	Q	T	T	A	L	M	I	I	T	C	E	T	L	R	D	T	A	G	V	L	K	E	A	Q	R	E	I	L	L	L	T	L	V	E	K	L	K	S	V	L	S	P	R	M	I
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.
Template Conservation
Template Sequence		D	L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W
Template Known Secondary structure									B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	I	S	G	Y	D	F	A	V	I	A	N	G	V	Q	E	P	W	H	A	I	T	L	G	Q	Q	V	L	T	I	M	S	E	R	L	P	I	E	R	I	Q	L	R	P	H	C	S	I	G	V	A	M	F	Y	G	D	L	T	A	E	Q	L	Y	S	R	A	I	S	A	A	F	T	A	R	H	K	G	K
Query Conservation
Alig confidence																			.																					.	.	.	.	.	.	.	.	.
Template Conservation																			.																					.	.	.	.	.	.	.	.	.
Template Sequence		I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	.	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	L	H	.	.	.	.	.	.	.	.	.	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S	G	G
Template Known Secondary structure							T	T								S			.																					.	.	.	.	.	.	.	.	.										T	T																				T	T	S
Template Predicted Secondary structure																			.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		393	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	I	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L	V	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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