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Job DescriptionP37649
Confidence98.59%DateThu Jan 5 11:56:21 GMT 2012
Rank24Aligned Residues122
% Identity16%Templatec3pjvD_
PDB info PDB header:lyaseChain: D: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd periplasmic domain
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2930.........40.........50.........60.........70.........80.........90. ....... .100......
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Query Sequence  VLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPN. QFQALRK. SFIPERPV
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Template Sequence  VSLESSRTQYVNQLRSHAQDAATALALSLTPNI. . DDPAXVELLVSSIFDSGYYSSIRVVDLKTDQTIVERNGIPAVTNV
Template Known Secondary structure  TTGGGT..T
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   25....30.........40.........50....... ..60.........70.........80.........90.........100..
 
   107..110.........120.........130.........140.........150......
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Query Sequence  PVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTL
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Template Sequence  PDWFVKLIGL. . . . EPAGGDALVSRGWEQAARVEVVSHPXFALAKLWQSA
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   103......110.. .......120.........130.........140........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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