Job Description P37649 Confidence 100.00% Date Thu Jan 5 11:56:21 GMT 2012 Rank 7 Aligned Residues 234 % Identity 26% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		K	R	L	T	E	E	S	D	I	L	N	A	L	E	N	H	Q	F	A	I	W	L	Q	P	Q	V	E	M	.	T	S	G	K	L	V	S	A	E	V	L	L	R	I	Q	Q	P	D	G	S	W	D	L	P	D	G	L	I	D	R	I	E	C	C	G	L	M	V	T	V	G	H	W	V	L	E	E	S	C	R	L
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		D	H	H	A	W	H	R	L	L	D	R	A	L	S	E	Q	H	F	Q	L	Y	F	Q	P	V	V	A	A	R	D	T	H	L	V	L	H	Y	K	V	L	S	R	L	L	D	E	Q	G	Q	T	I	P	A	G	R	F	L	P	W	L	E	R	F	G	W	T	S	R	L	D	L	L	X	L	E	Q	V	L	R	Q
Template Known Secondary structure																	T												S	S		T	T	S													T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	W	Q	E	R	G	I	M	L	P	L	S	V	N	L	S	A	L	Q	L	M	H	P	N	M	V	A	D	M	L	E	L	L	T	R	Y	R	I	Q	P	G	T	L	I	L	E	V	T	E	S	R	R	I	D	D	P	H	A	A	V	A	I	L	R	P	L	R	N	A	G	V	R	V	A	L	D	D	F
Query Conservation
Alig confidence									.	.	.	.	.																																												.
Template Conservation									.	.	.	.	.																																												.
Template Sequence		X	A	S	H	E	D	C	.	.	.	.	.	L	A	L	N	L	S	A	A	T	L	A	D	P	H	A	L	N	R	V	F	E	I	L	R	Q	H	S	D	L	G	P	R	L	T	L	E	I	G	E	E	Q	L	P	.	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F
Template Known Secondary structure		G	G	G					.	.	.	.	.																										T	G	G	G	T	T	T							S	S	S			.																T
Template Predicted Secondary structure									.	.	.	.	.																																												.
Template SS confidence
		489	490	.	.	.	.	.						.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600				.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		G	M	G	Y	A	G	L	R	Q	L	Q	H	M	K	S	L	P	I	D	V	L	K	I	D	K	M	F	V	E	G	L	P	G	D	.	.	.	S	S	M	I	A	A	I	I	M	L	A	Q	S	L	N	L	Q	M	I	A	E	G	V	E	T	E	A	Q	R	D	W	L	A	K	A	G	V	G	I	A	Q	G	F
Query Conservation																																				.	.	.
Alig confidence							.	.	.																											.	.	.
Template Conservation							.	.	.
Template Sequence		G	G	R	F	S	.	.	.	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	E	R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V	Q	G	Q
Template Known Secondary structure		T	T	T	G	G	.	.	.	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T		T																T	T										S											T		S				S	G
Template Predicted Secondary structure							.	.	.
Template SS confidence
		563	.	.	.	.				.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		644	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	R	P	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	G	E	P	A	P
Template Known Secondary structure		G	G					S
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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