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Job DescriptionP37649
Confidence92.10%DateThu Jan 5 11:56:21 GMT 2012
Rank55Aligned Residues80
% Identity21%Templatec3dhuC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:alpha-amylase; PDBTitle: crystal structure of an alpha-amylase from lactobacillus2 plantarum
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   528.530.........540.. .......550.........560... ......570.........580.........590..
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Query Sequence  PGTLILEVTESRRID. . DPHAAVAILRPLRNAGVRVAL. . . . . . . . . . . . . DDFGMGYAGLRQLQHMKSLPIDVLKIDKM
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Template Sequence  RNEMIYSVFVRNYSEAGNFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYA. . . . . . . . . . . IKDYRGINPE
Template Known Secondary structure  GG


SSS
STTT
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S
B

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TTS...........BS
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GG
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   10.........20.........30.........40.........50.........60........ .70........
 
   593......600.........610.........620...
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Query Sequence  FVEGLPGDSSMIAAIIMLAQSLNLQMIAEGV
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Template Sequence  Y. . . . . GTLADFKALTDRAHELGMKVMLDIV
Template Known Secondary structure  G.....

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   79 80.........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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