Job Description P37649 Confidence 81.64% Date Thu Jan 5 11:56:21 GMT 2012 Rank 172 Aligned Residues 137 % Identity 9% Template c2otdC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	S	C	R	L	L	A	A	W	Q	E	R	G	I	M	L	P	L	S	V	N	L	S	A	L	Q	L	M	H	P	N	M	V	A	D	M	L	E	L	L	T	R	Y	R	I	Q	P	G	T	L	I	L	E	V	T	E	S	R	R	I	D	D	P	H	A	A	V	A	I	L	R	P	L	R	N	A	G	V
Query Conservation
Alig confidence																.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		L	S	Q	V	A	E	R	C	R	E	H	G	X	X	.	.	.	.	.	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	X	V	A	L	A	A	R	Q	L	W	A	G	X	T	P	P	L	L	S	S	F	E	I	D	A	L	E	A	A	Q	Q	.	.	.	.	.	.	.	.	A	A	P	E	L
Template Known Secondary structure													T			.	.	.	.	.									T	T																	T	T	T	S								S											.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	L	D	D	F	G	M	G	Y	A	G	L	R	Q	L	Q	H	M	K	S	L	P	I	D	V	L	K	I	D	K	M	F	V	E	G	L	P	G	D	S	S	M	I	A	A	I	I	M	L	A	Q	S	L	N	L	Q	M	I	A	E	G	V	E	T	E	A	Q	R	D	W	L	A	K	A	G	V	G	I
Query Conservation
Alig confidence														.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		P	R	G	L	L	L	D	E	W	R	D	D	.	.	.	W	R	E	L	T	A	R	L	G	C	V	S	I	H	L	N	H	K	L	L	D	.	.	.	.	.	.	.	.	.	K	A	R	V	X	Q	L	K	D	A	G	L	R	I	L	V	Y	T	V	N	K	P	Q	H	A	A	E	L	L	R	W	G	V	D	C
Template Known Secondary structure								S	S			T	T	.	.	.									T		S						G	G	G			.	.	.	.	.	.	.	.	.										T	T																					T
Template Predicted Secondary structure														.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		640	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions