 |
Job Description | P37649 | Confidence | 46.62% | Date | Thu Jan 5 11:56:21 GMT 2012 |
Rank | 318 | Aligned Residues | 92 |
% Identity | 15% | Template | c2jbmA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: qprtase structure from human
|
Resolution | 2.0 Å |
|
 |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | I | D | D | P | H | A | A | V | A | I | L | R | P | L | R | N | A | G | V | R | V | A | L | D | D | F | G | M | G | Y | A | G | L | R | Q | L | Q | H | M | K | S | L | P | I | D | V | L | K | I | D | K | M | F | V | E | G | L | P | G | D | S | S | M | I | A | A | I | I | M | L | A | Q | S | L | N | L | Q | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|
|   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   | . | . | . | . | . |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |
|   |
|
Template Sequence |   |
V | A | A | G | G | V | E | K | A | V | R | A | A | R | Q | A | A | D | F | A | L | K | V | E | V | E | C | S | . |
. |
. |
. |
. |
S | L | Q | E | A | V | Q | A | A | E | A | G | A | D | L | V | L | L | D | N | F | K | P | E | E | L | H | P | T | A | T | V | L | K | . |
. |
. |
. |
. |
A | Q | F | P | S | V | A | V |
Template Known Secondary structure |   |
 |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  | S | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
240 | . | . | . | . | . | . | . |
  |
  |   |
619 | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | E | G | V | E | T | E | A | Q | R | D | W | L | A | K | A | G | V | G | I | A |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
E | A | S | G | G | I | T | L | D | N | L | P | Q | F | C | G | P | H | I | D | V | I |
Template Known Secondary structure |   |
 |  |  | S | S |
|
| T | T | T |  |  |  |  |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|