Return to main results Retrieve Phyre Job Id

Job DescriptionP37649
Confidence69.30%DateThu Jan 5 11:56:21 GMT 2012
Rank239Aligned Residues165
% Identity18%Templatec2gjlA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:hypothetical protein pa1024; PDBTitle: crystal structure of 2-nitropropane dioxygenase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470..... ....480.........490.........500.........510.........520.........530
Predicted Secondary structure 







......















Query SS confidence 


















. . . . . .






















































Query Sequence  DLPDGLIDRIECCGLMVTV. . . . . . GHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGT
Query Conservation       
   

  

   
......   
                     



   
        
             
Alig confidence 


















......











....






































Template Conservation 

   

 

  

  
 
        
 
   
   ....
     
 


                       
  
 
Template Sequence  VGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARC. . . . RELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVE
Template Known Secondary structure  T
STTSB
TTTSSS....
SS




SS


TT

Template Predicted Secondary structure 













....














Template SS confidence 















































































   26...30.........40.........50.........60.. .......70.........80.........90.........100.
 
   531........540.........550.........560.........570.........580.........590....... ..600........
Predicted Secondary structure 



















..

Query SS confidence 


































































. .










Query Sequence  LILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL. . PGDSSMIAAII
Query Conservation 
  

 
                
   
  
 

 

 
 
   

  
  
  
 



       ..         
 
Alig confidence 





...........















.


....

























..










Template Conservation     
 
...........   
      
  
  . 
 ....
   
  
   


 

  
 



           

 
Template Sequence  TAGNDP. . . . . . . . . . . GEHIAEFRRHGVKVIH. KCT. . . . AVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLP
Template Known Secondary structure  S

...........TT
.S....STT
S
TT
SB


SS


Template Predicted Secondary structure 




...........




.


....


















Template SS confidence 















































































   102..... ..110.........120... ... ...130.........140.........150.........160.....
 
   609610.........620 .........630.........640.
Predicted Secondary structure 



.






Query SS confidence 











.




















Query Sequence  MLAQSLNLQMIA. EGVETEAQRDWLAKAGVGIAQ
Query Conservation    
    
 


. 


       
   
 
  
Alig confidence 











.




















Template Conservation   
     








    
 
 








 
Template Sequence  AAANRLRVPIIASGGFADGRGLVAALALGADAIN
Template Known Secondary structure  TT

S
SS

ST
S
Template Predicted Secondary structure 









Template SS confidence 

































   166...170.........180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions