Job Description P37649 Confidence 36.15% Date Thu Jan 5 11:56:21 GMT 2012 Rank 345 Aligned Residues 65 % Identity 26% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

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		543	.	.	.	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.	.	.							.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																.								.	.	.	.	.	.
Query SS confidence																.								.	.	.	.	.	.
Query Sequence		D	P	H	A	A	V	A	I	L	R	P	L	R	N	.	A	G	V	R	V	A	L	.	.	.	.	.	.	D	D	F	G	M	G	Y	A	G	L	R	Q	L	Q	H	M	K	S	L	P	I	D	V	L	K	I	D	K	M	F	V	E	G	L	P	G	D	S	S	M	I	A	A	I	I	M	L	A	Q	S	L	N
Query Conservation																.								.	.	.	.	.	.
Alig confidence																.								.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		D	L	A	G	I	D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y	L	N	P	I	F	K	A	P	T	N	H	K	Y	D	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	Y	M	A	V	D	P	A	F	.	.	.	.	.	G	D	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A
Template Known Secondary structure									T						T	T	T								S						S	S	S	S			S	.	.	.	.	.	.	.	.	.	.	.		S							T	T	T	.	.	.	.	.																S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.												.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
						616	.	.	.	620	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	Q	M	I	A	E	G	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		N	G	P	K	G	Y	L	I	L	D	G	V
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions