Job Description P37649 Confidence 33.93% Date Thu Jan 5 11:56:21 GMT 2012 Rank 353 Aligned Residues 104 % Identity 18% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	D	P	H	A	A	V	A	I	L	R	P	L	R	N	A	G	V	R	V	A	L	D	D	F	G	M	G	Y	A	G	L	R	Q	L	Q	H	M	K	S	L	P	I	D	V	L	K	I	D	K	M	F	V	E	G	L	P	G	D	S	S	M	I	A	A	I	I	M	L	A	Q	S	L	N	L	Q	M	I	A	.
Query Conservation																																																																																	.
Alig confidence																							.	.								.	.	.																							.	.												.	.										.
Template Conservation																							.	.								.	.	.																							.	.												.	.
Template Sequence		D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	.	.	S	A	E	R	G	K	E	.	.	.	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	.	.	N	G	L	E	I	L	K	W	I	K	E	.	.	R	S	P	E	T	E	V	I	V	I
Template Known Secondary structure																		T					.	.			S	S				.	.	.								S			S						S	B		S	S	S	.	.	B											.	.			T	T	S
Template Predicted Secondary structure																							.	.								.	.	.																							.	.												.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	E	T	E	A	Q	R	D	W	L	A	K	A	G	V	G	I	A	Q	G	F	L	F	A	R	P	L	P	I	E	I	F	E	E	S	Y
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		T	G	H	G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	.	.	.	.	L	T	K	P	C	M	L	E	E	I	E	L	T	I
Template Known Secondary structure				T	T										T	T	T					.	.	.	.				S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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