 |
Job Description | P37649 | Confidence | 71.75% | Date | Thu Jan 5 11:56:21 GMT 2012 |
Rank | 226 | Aligned Residues | 70 |
% Identity | 17% | Template | c1gjuA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:maltodextrin glycosyltransferase; |
PDBTitle: maltosyltransferase from thermotoga maritima
|
Resolution | 2.4 Å |
|
 |
  |   |
543 | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | |
|
|
. | . | . | . | . | . | 600 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | H | A | A | V | A | I | L | R | P | L | R | N | A | G | V | R | V | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | F | G | M | G | Y | A | G | L | R | Q | L | Q | H | M | K | S | L | P | I | D | V | L | K | I | D | K | M | F | . |
. |
. |
V | E | G | L | P | G | D | S | S | M | I | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | F | F | K | M | M | L | L | L | P | F | V | K | S | L | G | A | D | A | I | Y | L | L | P | V | S | R | M | S | D | L | F | K | K | G | D | A | P | S | P | Y | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | N | P | M | E | L | D | E | R | Y | H | D | P | L | L | E | P | F | K | V | D | E | E | F | K | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
|
|  |  |  |
|
| S | S |
| S | S | S | S |
|
| T | T | S | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| G | G | G | S |
| G | G | G | T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
  |   |
607 | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | M | L | A | Q | S | L | N | L | Q | M | I | A | E | G | V |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |
|
Template Sequence |   |
F | V | E | A | C | H | I | L | G | I | R | V | I | L | D | F | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|