Return to main results Retrieve Phyre Job Id

Job DescriptionP0A761
Confidence97.38%DateThu Jan 5 11:04:55 GMT 2012
Rank249Aligned Residues121
% Identity15%Templated1umya_
SCOP infoTIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50..... ....60.........70.........80. ........90..
Predicted Secondary structure 







.............











.....



Query SS confidence 
























. . . . . . . . . . . . .

























. . . . .










Query Sequence  KPEIVAAMALAAEQAGAVAIRIEGV. . . . . . . . . . . . . ANLQATRAVVSVPIIGIVKRDLEDSP. . . . . VRITAYIEDVD
Query Conservation 
   
   
  
   

  
     .............
 
  

     


   
       .....
        
 
Alig confidence 
























.............

























.....










Template Conservation   

 
  

  

 





 



 

   


  

 





      






 
  
             

  
Template Sequence  HPEAVRQLHREFLRAGSNVMQTFTFYASSGQKVNEAACDIARQVADEGDALVAGGVSQTPSYLSCKSETEVKKIFHQQLE
Template Known Secondary structure 
T









TTT



TT

Template Predicted Secondary structure 


























Template SS confidence 















































































   52.......60.........70.........80.........90.........100.........110.........120.........130.
 
   93......100.........110.........120.........130.. .......140.........150...
Predicted Secondary structure 












...........





Query SS confidence 







































. . . . . . . . . . .




















Query Sequence  ALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTD. . . . . . . . . . . CSTPEDGLACQKLGAEIIGTT
Query Conservation      



 
 
                     

 

  ...........
 
   
      
 
 
 
 
Alig confidence 













..























...........




















Template Conservation   
   


 

 

..     

 

  
      

  
 
    
 
 
     
   
       



Template Sequence  VFMKKNVDFLIAEY. . FEHVEEAVWAVEALKTSGKPIAATMCIGPEGDLHGVSPGECAVRLVKAGAAIVGVN
Template Known Secondary structure  TT
S

..
S
TT
S



TT

TT


TT
S
Template Predicted Secondary structure 




..




















Template SS confidence 







































































   147..150.........160 .........170.........180.........190.........200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions