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Job DescriptionP0A761
Confidence95.05%DateThu Jan 5 11:04:55 GMT 2012
Rank314Aligned Residues189
% Identity15%Templated1rbla1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50..... ....60.........70.........80...... ...90.
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Query Sequence  KPEIVAAMALAAEQAGAVAIRIEGV. . . . . . . . . . . . . . . . . ANLQATRAVVSVPIIGIVKRDLEDSPVRITA. . YIEDV
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Template Sequence  SAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIK. . . . . . GHYLNVTAPTCEEMMKRA
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   181........190.........200.........210.........220.........230...... ...240.........250....
 
   92.......100.........110.........120.........130.. .......140.........150.......
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Query Sequence  DALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTD. . . . . . . . . . . . . . CSTPEDGLACQKLGAEIIGTTLSGY
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Template Sequence  EFAKELGMPIIMHDFLTAGF. TANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVV.
Template Known Secondary structure  TT
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TTS
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   255....260.........270.... .....280.........290.........300.........310.........320.........330..
 
   158.160.........170...... ...180.........190....... ..200...... ...210....
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Query Sequence  TTPETPEEPDLALVKTLSD. . . . . . . . . . . . . . . . . . . . AGCRVIAEGRYNTPAQAADAM. RHGAWAVTV. . GSAITRLE
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Template Sequence  GKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGI. HVWHMPALVEIFGDDSVLQFGGGTLGHPW
Template Known Secondary structure  SSS



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BGGGTB
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   333......340.........350.........360.........370.........380.. .......390.........400.........410.
 
   215. ...220........
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Query Sequence  HI. . . CQWYNTAMKKAV
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Template Sequence  GNAPGATANRVALEACV
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   412.......420........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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