Job Description P0A761 Confidence 96.36% Date Thu Jan 5 11:04:55 GMT 2012 Rank 286 Aligned Residues 131 % Identity 16% Template d1r2ra_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																			.	140	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	.	.	.	.	.	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	C	Q	K	L	G	A
Query Conservation																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	M	I	K	D	C	G	A	T	W	V	V	L	G	H	S	E	R	R	H	V	F	G	E	S	D	E	L	I	G	Q	K	V	A	H	A	L	S	E	G	L	G	V	I	A	C	I	G	E	K	L	D	E	R	E	A	G	I	T	E	K	V	V	F	E	Q	T	K	V	I	A	D	N	V	K	D	W	S	K
Template Known Secondary structure								T	T							S							T	S																	T	T																T	T																T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure										.	.																							.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence										.	.																							.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		E	I	I	G	T	T	L	S	.	.	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	.	.	.	.	.	.	.	.	.	.	.	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	.	G	A	W	A	V	T	V	G	S	A	I	T	R	L
Query Conservation										.	.																							.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence										.	.																							.	.	.	.	.	.	.	.	.	.	.											.												.
Template Conservation																																																							.
Template Sequence		V	V	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	T	P	Q	Q	A	Q	E	V	H	E	K	L	R	G	W	L	K	S	N	V	S	D	A	V	A	Q	S	T	R	I	I	Y	G	G	S	V	.	T	G	A	T	C	K	E	L	A	S	Q	P	D	V	D	G	F	L	V	G	G	A	S	L	K	P
Template Known Secondary structure									G	G	G	S	S	S	S																							T														S			.		T	T	T						T	S	T	T							S	G	G	G	G	S	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	I	C	Q	W	Y	N	T	A	M	K	K	A
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		E	.	.	.	.	.	F	V	D	I	I	N	A	K
Template Known Secondary structure			.	.	.	.	.						T	S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		239						240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions