Job Description P0A761 Confidence 91.27% Date Thu Jan 5 11:04:55 GMT 2012 Rank 388 Aligned Residues 189 % Identity 14% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	.	V	R	I	T	A	Y	I	E	D	V	D
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.							.
Template Conservation																																																											.	.	.	.	.
Template Sequence		S	G	R	N	Y	G	R	V	V	Y	E	G	L	K	G	G	L	D	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	.	.	.	.	.	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E
Template Known Secondary structure																T	T		S						T	T		S	S		T	T	S																					T	S				.	.	.	.	.								S	S
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																		.	.																																																												.
Template Sequence		F	A	K	S	L	G	S	V	I	I	M	V	D	L	I	V	.	.	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	.	V	G
Template Known Secondary structure						T	T		S						G	G	G	.	.														T	T	T								T	T	T					S		T	T	S	S														T		S							T	.	T	S
Template Predicted Secondary structure																		.	.																																																												.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Query Sequence		T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	.	R	H	G	A	W	A	V	T	V	.	.	G	S	A	I	T	R	L	E	H
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.										.										.	.
Template Conservation																																																			.
Template Sequence		K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	.	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	Q	G
Template Known Secondary structure		S	T	T																S					B	G	G	G	T	B		S					T	T											S		.		G	G	G										S	S											T		T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		216				.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		I	.	.	.	C	Q	W	Y	N	T	A	M	K	K	A	V
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		I	Q	A	G	A	T	A	N	R	V	A	L	E	A	M	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions