Job Description P0A761 Confidence 84.88% Date Thu Jan 5 11:04:55 GMT 2012 Rank 445 Aligned Residues 219 % Identity 14% Template c3r89A_ PDB info PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548 Resolution 1.84 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	A	Q	L	D	Q	K	I	A	A	N	G	G	L	I	V	S	C	Q	P	V	P	D	S	P	L	.	.	.	.	.	.	.	.	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	V	A	N	L
Query Conservation																													.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.							.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		I	I	D	K	L	Y	E	K	V	S	K	N	G	F	V	C	I	G	L	D	.	S	S	I	D	Y	I	P	E	N	X	K	A	G	K	S	V	S	E	A	L	F	S	Y	N	K	E	I	I	D	Q	T	Y	D	V	C	A	I	Y	K	L	Q	I	A	Y	Y	E	S	Y	G	I	E	G	X	I	A	Y	R	D	T
Template Known Secondary structure															S							.			G	G	G	S						T	T																			T	T	S		S											T	T
Template Predicted Secondary structure																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																									.	.																																							.
Query SS confidence																																									.	.																																							.
Query Sequence		Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	.	.	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	.
Query Conservation																																									.	.																																							.
Alig confidence																									.	.	.	.	.												.	.																																							.
Template Conservation																									.	.	.	.	.
Template Sequence		L	S	Y	L	R	E	K	D	L	L	S	I	G	D	V	K	R	S	D	I	A	A	S	.	.	.	.	.	A	K	X	Y	A	K	A	H	F	E	G	D	F	E	T	D	F	I	T	L	N	P	Y	X	G	X	D	S	I	E	P	Y	E	E	Y	I	E	K	G	D	K	G	V	F	V	L	L	R	T	S	N	P
Template Known Secondary structure								T	T																.	.	.	.	.										S	G	G	G			S							T	T		G	G	G	T	G	G	G						T	T	S											S	G
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
																		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	.	A	G	C	R	V	I	A	E	G	.	R	Y	N	T	P	A	Q	A	A	D	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.										.			.
Template Conservation																																																																								.
Template Sequence		G	A	K	D	F	E	V	L	P	V	D	G	E	E	F	F	Y	K	V	G	D	K	X	R	E	L	N	E	K	Y	I	G	K	S	G	F	G	P	I	G	L	V	V	G	A	T	H	S	E	E	V	E	K	I	R	K	R	Y	D	K	X	F	F	L	I	P	G	F	G	A	.	Q	K	A	D	S	X	N	V	Y
Template Known Secondary structure		G	G	G	T	T	T	T				T	T			T													G	G	G			T	T	S																							T	T	T										S	.	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.
		198	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																.	.	.	.
Query SS confidence				.	.	.	.																.	.	.	.
Query Sequence		R	H	.	.	.	.	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	.	.	.	.	H	I	C	Q	W	Y	N	T	A	M	K	K	A	V
Query Conservation				.	.	.	.																.	.	.	.
Alig confidence				.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		K	L	L	E	G	L	N	G	G	V	V	N	S	S	R	A	I	L	K	N	W	Q	N	Y	E	D	G	S	E	K	V	G	Y	Y	A	R	K	K	A
Template Known Secondary structure		T	T		B	T	T	B	S											T	G	G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions