Job Description P0A761 Confidence 97.22% Date Thu Jan 5 11:04:55 GMT 2012 Rank 258 Aligned Residues 160 % Identity 18% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	.	.	.	.	.	.	.	.	.	.	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D
Template Known Secondary structure																	T		S							G	G	G													T	S			S	S				.	.	.	.	.	.	.	.	.	.					S											T	T		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		104	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		I	D	G	T	D	R	P	R	.	.	.	.	.	.	.	.	.	.	.	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	.	.	.	.	.	.	.	.	.	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P
Query Conservation										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	.	.	.	A	D	T	V	G	C	A	T
Template Known Secondary structure						G	G	G																										T	T								T	T	G	G	G	S																		S					.	.	.			S	S	S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200
		164	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure															.										.	.	.	.
Query SS confidence															.										.	.	.	.
Query Sequence		E	E	P	D	L	A	L	V	K	T	L	S	D	.	A	G	C	R	V	I	A	E	G	.	.	.	.	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V
Query Conservation															.										.	.	.	.
Alig confidence															.										.	.	.	.			.
Template Conservation																															.
Template Sequence		P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	.	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure																	S	S							B		T	T	S		.												T
Template Predicted Secondary structure																															.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions