Job Description P0A761 Confidence 88.73% Date Thu Jan 5 11:04:55 GMT 2012 Rank 416 Aligned Residues 196 % Identity 18% Template c3h5dD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																.																													.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																.																													.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		A	N	G	G	L	I	V	S	C	Q	P	V	P	D	.	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	L	Q	A	T	R	A	V	V	S	.	.	V	P	I	I	G	I	V	K	R	D
Query Conservation																.																													.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																.																													.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		K	E	C	K	I	I	T	A	F	I	T	P	F	H	E	D	G	S	I	N	F	D	A	I	P	A	L	I	E	H	L	L	A	H	H	T	D	G	I	L	L	A	G	T	T	A	E	S	P	T	L	T	H	D	E	E	L	E	L	F	A	A	V	Q	K	V	V	N	G	R	V	P	L	I	A	G	V	G	T	N
Template Known Secondary structure		T	T											B		T	T	S	S	B		T	T												T	T							S	S	T	T	T	T	G	G	G	S																S	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																								.							.	.																					.								.	.	.	.	.	.	.	.
Query SS confidence																								.							.	.																					.								.	.	.	.	.	.	.	.
Query Sequence		L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	.	A	D	I	I	A	I	.	.	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	.	H	G	L	L	A	M	T	.	.	.	.	.	.	.	.	D	C	S	T	P	E	D	G	L	A	C	Q	K
Query Conservation																								.							.	.																					.								.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.													.							.	.																					.								.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		D	T	R	D	.	.	.	.	.	.	S	I	E	F	V	K	E	V	A	E	F	G	G	F	A	A	G	L	A	I	V	P	Y	Y	N	K	P	S	Q	E	G	M	Y	Q	H	F	K	A	I	A	D	A	S	D	L	P	I	I	I	Y	N	I	P	G	R	V	V	V	E	L	T	P	E	T	M	L	R	L	A	D
Template Known Secondary structure		S				.	.	.	.	.	.															S									S	S																	S		S	S												S												T	T
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		87	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	C	Q	W	Y	N	T	A	M
Query Conservation
Alig confidence		.									.	.	.	.	.	.	.	.	.																									.	.
Template Conservation		.									.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		.	H	P	N	I	I	G	V	K	.	.	.	.	.	.	.	.	.	E	C	T	S	L	A	N	M	A	Y	L	I	E	H	K	P	E	E	F	L	I	Y	T	G	.	.	E	D	G	D	A	F	H	A	M	N	L	G	A	D	G	V	I	S	V	A	S	H	T	N	G	D	E	M	H	E	M	F	T	A	I	A
Template Known Secondary structure		.	S	T	T						.	.	.	.	.	.	.	.	.			S														S	S						S	.	.		G	G	G								T							S	T
Template Predicted Secondary structure		.									.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
			161	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		225	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		229	230

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions