Job Description P0A761 Confidence 86.37% Date Thu Jan 5 11:04:55 GMT 2012 Rank 435 Aligned Residues 176 % Identity 16% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence												.																												.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation												.																																																												.	.	.	.	.	.
Template Sequence		F	F	D	T	T	L	R	D	G	E	.	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	E	G	D	.	.	.	.	.	.	I	D	R	A
Template Known Secondary structure						T	T	T				.																		T		S							G	G	G																	S	S								S	S				.	.	.	.	.	.
Template Predicted Secondary structure												.																																																												.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.														.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	.	.	.	.	.	.	.	.	.	E	D	G	L	A	C	Q	K	L	G	A	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T
Template Known Secondary structure						T	T		S	S										S							T	T																				T	T		S								T	G	G	G	S															T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.									.	.	.	.
Query SS confidence																															.	.	.	.	.									.	.	.	.
Query Sequence		I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	.	.	.	.	.	G	C	R	V	I	A	E	G	.	.	.	.	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V
Query Conservation																															.	.	.	.	.									.	.	.	.
Alig confidence							.	.	.																						.	.	.	.	.									.	.	.	.			.
Template Conservation							.	.	.																																									.
Template Sequence		V	I	N	I	P	.	.	.	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	.	A	T	A	N	A	L	A	A	I	E	N	G	A	R	R	V
Template Known Secondary structure							.	.	.		S	S	S																			T	T	G	G	G	S							B		T	T	S		.											T	T
Template Predicted Secondary structure							.	.	.																																									.
Template SS confidence
		164	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions