Job Description P0A761 Confidence 98.70% Date Thu Jan 5 11:04:55 GMT 2012 Rank 155 Aligned Residues 203 % Identity 13% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																						.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	L	L	A	Q	L	D	Q	K	I	A	A	N	G	G	L	I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	Q
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.						.	.	.	.
Template Sequence		I	S	A	G	A	K	F	R	A	A	V	A	A	E	Q	P	L	Q	V	V	G	.	.	.	.	.	.	.	A	I	T	A	Y	.	.	.	.	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N
Template Known Secondary structure															S	S	S						.	.	.	.	.	.	.		S	S			.	.	.	.								T	T		S																S		S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.						.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	V	P	V	E	T	L	L	A	R	I	H
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.											.	.	.
Template Sequence		R	I	T	N	A	T	N	L	P	L	L	.	V	D	I	D	T	G	W	G	G	A	.	.	.	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T
Template Known Secondary structure									S				.				T	T		S	S	S		.	.	.													T	T		S							B						T	T							B																		S
Template Predicted Secondary structure													.											.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		124	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		H	H	G	L	L	A	M	T	D	C	S	T	P	.	.	.	.	.	.	.	.	.	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	.	.	.	I	A	E	G	R	Y	N	T	P	A
Query Conservation															.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	E	A	.	.	.	.	.	.	.	.	.	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F
Template Known Secondary structure			T	T	S																												T		S							.	.	.	.	.	.	.	.	.			S													S		B						T	T	S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	.	I	C	Q	W	Y	N	T	A	M	K	K	A
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	M	N	K	A	A	L	N	F	Y	E	T	V	R	R	D
Template Known Secondary structure									T	T								S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions