Job Description P0A761 Confidence 79.61% Date Thu Jan 5 11:04:55 GMT 2012 Rank 462 Aligned Residues 179 % Identity 17% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	L	Q	A	T	R	A	V	V	S	.	.	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	V	A	S	T	S	V	A	D	.	.	.	.	.	.	A	V	A	Q	A	K	L	Y	E
Template Known Secondary structure																T	T		S		B	B	T	T	S	G	G	G	T	G	G	G																		T	T	S	S		B							S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure													.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	A	D	I	I	A	I	D	G	.	.	.	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	.	.	.	.	.	.	.	.	D	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E
Query Conservation													.	.	.																										.	.	.	.	.	.	.	.
Alig confidence													.	.	.																										.	.	.	.	.	.	.	.															.									.	.	.	.	.
Template Conservation																																																															.									.	.	.	.	.
Template Sequence		K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	.	P	R	I	R	Y	I	K	D	.	.	.	.	.	A	S	T	N	T
Template Known Secondary structure				T		S									S	S																			S	S								T	T	T		S	S												T	S	.	T	T							.	.	.	.	.		S	S
Template Predicted Secondary structure																																																															.									.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.						.	.	.	.	170
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	C	Q	W	Y	N	T	A	M	K	K
Query Conservation
Alig confidence														.								.	.	.	.
Template Conservation														.								.	.	.	.
Template Sequence		G	R	L	L	S	I	I	N	R	C	G	D	.	A	L	Q	V	F	S	A	.	.	.	.	S	A	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C	I	A	P	R	Q	S	V	A	L	Y	E	L	C	K	A	Q
Template Known Secondary structure												G	G	.	G	S						.	.	.	.	T	T	S								T	T							G	G	G	G	T														T	T
Template Predicted Secondary structure														.								.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions