Job Description P0A761 Confidence 88.43% Date Thu Jan 5 11:04:55 GMT 2012 Rank 421 Aligned Residues 188 % Identity 13% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	L	D	Q	K	I	A	A	N	G	G	L	I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	I	R	H	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	.	.	.	.	.	.	.	.	.	.	.	L	A	T	Y	M	V	E	G	G	S	S	.	.	.	K	A	F	T	V	I	K	K	M	M	Y	A	D	P	Q	A	.	.	.	.	.	.	.	.	L	H	A	L	L	D	K	L
Template Known Secondary structure									T	T	T	S	S												.	.	.	.	.	.	.	.	.	.	.								S	S			.	.	.	S	S									T	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150												.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	.	.	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	A	M	T	D	C	S	.	T	P	E	D	G	L	A	C	Q	K	L	G	A	E
Query Conservation																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D
Template Known Secondary structure															T	T		S							T	T	G	G	G	S									T											S		S			T	T										T	T	T	T	T	T						T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.					.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210						.
Predicted Secondary structure																																										.	.	.	.	.	.						.	.	.	.										.	.									.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.						.	.	.	.										.	.									.	.	.	.	.
Query Sequence		I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	.	.	.	.	.	.	T	P	A	Q	A	.	.	.	.	A	D	A	M	R	H	G	A	W	.	.	A	V	T	V	G	S	A	I	.	.	.	.	.	T
Query Conservation																																										.	.	.	.	.	.						.	.	.	.										.	.									.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.						.	.	.	.										.	.									.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										T	T	T	S						B		G	G	G	G	G	S														T	T	T	T	T	S	S				B		B	S	S				T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.													270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	H	I	C	Q	W	Y	N	T	A	M	K	K
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		P	P	E	H	A	.	G	V	F	V	E	A	V	H	R
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		334	.	.	.	.		.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions