Job Description P0A761 Confidence 99.23% Date Thu Jan 5 11:04:55 GMT 2012 Rank 110 Aligned Residues 203 % Identity 13% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	Q	L	D	Q	K	I	A	A	N	G	G	L	I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	.	.	.	.	.	.	.	.	.	.	.	.	E	G	V	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.														.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.											.	.						.	.
Template Conservation													.	.	.														.	.	.	.																																									.	.						.	.
Template Sequence		K	L	S	L	I	Q	Q	L	K	Q	Q	.	.	.	K	L	S	V	G	I	L	S	A	N	W	L	Q	.	.	.	.	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	T	H	C	F	K	.	.
Template Known Secondary structure										T	T		.	.	.						G	G	G	S		G	G	G	.	.	.	.											T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	T	T	S			.	.
Template Predicted Secondary structure													.	.	.														.	.	.	.																																									.	.						.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	.	.	.	.	.	.	.	.	.	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	E	D	G	L	A	C
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	V	H	L	X	V	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y
Template Known Secondary structure		.	.	.	.	.	.	.							S												T	T		S						T	T		T	T	S									T	T						T	T													T	T	S		G	G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure															.	.																				.	.	.	.	.																												.	.
Query SS confidence															.	.																				.	.	.	.	.																												.	.
Query Sequence		Q	K	L	G	A	E	I	I	G	T	T	L	S	.	.	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	.	.	.	.	.	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	.	.	W	A	V	T	V	G	S	A	I	T	R	L
Query Conservation															.	.																				.	.	.	.	.																												.	.
Alig confidence				.											.	.																				.	.	.	.	.														.														.	.
Template Conservation				.																																																		.
Template Sequence		L	D	.	Q	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	.	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G
Template Known Secondary structure		T	T	.	T		S						S			T	T	T	T																				G	G	G	G	G	G							S	S		.											S	S	S									G	G	G	G	S	S
Template Predicted Secondary structure				.																																																		.
Template SS confidence
		145	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	I	C	Q	W	Y	N	T	A	M	K	K	A	V
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		E	.	.	L	K	T	N	L	K	V	W	K	S	S	I
Template Known Secondary structure			.	.
Template Predicted Secondary structure			.	.
Template SS confidence
		223			.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions