Job Description P0A761 Confidence 81.73% Date Thu Jan 5 11:04:55 GMT 2012 Rank 455 Aligned Residues 170 % Identity 14% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.
Query Sequence		Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L
Query Conservation																																				.	.	.	.	.	.	.
Alig confidence					.					.																										.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation					.					.																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	E	.	K	A	N	F	.	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	.	.	.	.	.	.	.	.	.	.	T	H	I	Q	C	R	L	D	A	A	K	V	A
Template Known Secondary structure		G	S	T	.	T				.																T		S							G	G	G														S			S	S				.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure					.					.																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.		.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70											.	.	.	.	.	.	.	.	.	80	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																.	.	.	.											.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																.	.	.	.											.	.	.	.	.	.
Query Sequence		A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	.	.	.	.	.	.	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	.	.	.	.	L	L	A	M	T	D	C	S	T	P	.	.	.	.	.	.	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T
Query Conservation																			.	.	.	.	.	.																.	.	.	.											.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V
Template Known Secondary structure				T	T		S								S																									T	T	S							S	S	T	T	T	S													G	G	G		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	.	.	.	.	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.			.
Template Conservation																																			.
Template Sequence		A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	.	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure																			T	T	T	S							B		T	T	S		.											T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions