Job Description P0A761 Confidence 90.10% Date Thu Jan 5 11:04:55 GMT 2012 Rank 402 Aligned Residues 117 % Identity 9% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	.	A	G	C
Query Conservation																																																																														.
Alig confidence								.	.	.																																													.	.	.	.	.	.																		.
Template Conservation								.	.	.																																													.	.	.	.	.	.
Template Sequence		K	I	L	V	V	D	.	.	.	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	G	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	.	.	.	.	.	.	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M
Template Known Secondary structure								.	.	.	S																T								S														S						.	.	.	.	.	.	T	T		S	S	S															S
Template Predicted Secondary structure								.	.	.																																													.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	C	Q	W	Y	N	T	A	M	K	K	A	V
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		P	I	I	M	L	T	A	K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y	V	T	K	P	.	.	F	S	T	R	E	L	L	A	R	V	K	A	N	L	R	R	Q	L
Template Known Secondary structure									T	T											T	T								S	.	.
Template Predicted Secondary structure																															.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions