Job Description P0A761 Confidence 74.72% Date Thu Jan 5 11:04:55 GMT 2012 Rank 480 Aligned Residues 183 % Identity 15% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	L	Q	A	T	R	A	V	V	S	.	.	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		D	I	E	A	F	S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	Y	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I	L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	T	D	E	.	.	.	.	.	.	A	V	A	L	A	K	D	A	E
Template Known Secondary structure																T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure													.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	A	D	I	I	A	I	D	G	.	.	.	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	.	.	.	.	.	.	.	.	D	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E
Query Conservation													.	.	.																										.	.	.	.	.	.	.	.
Alig confidence													.	.	.																										.	.	.	.	.	.	.	.														.											.	.	.	.
Template Conservation																																																														.											.	.	.	.
Template Sequence		A	A	G	A	D	A	L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	F	S	D	E	L	L	V	R	L	A	Y	.	I	P	N	I	R	A	I	K	X	P	.	.	.	.	L	P	A	D	A
Template Known Secondary structure				T		S									S	S																			S	S								G	G	G	T														T	.	S	T	T								.	.	.	.			T	T
Template Predicted Secondary structure																																																														.											.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.					.	.	.	200	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	C	Q	W	Y	N	T	A	M	K	K
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		D	Y	A	G	E	L	A	R	L	R	P	K	L	S	D	D	F	A	I	G	Y	S	.	.	G	D	W	G	C	T	D	A	T	L	A	G	G	D	T	W	Y	S	V	V	A	G	L	L	P	V	P	A	L	Q	L	X	R	A	A	Q	A	G
Template Known Secondary structure											T	T	T	S		T	T							.	.											T	T		S					S	G	G	G	T														T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions