Job Description P0A761 Confidence 97.84% Date Thu Jan 5 11:04:55 GMT 2012 Rank 226 Aligned Residues 208 % Identity 12% Template c2qcnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																.																															.	.								.	.	.	.	.	.	.													.	.	.
Query SS confidence																.																															.	.								.	.	.	.	.	.	.													.	.	.
Query Sequence		L	L	A	Q	L	D	Q	K	I	A	A	N	G	G	.	L	I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	.	.	A	V	A	I	R	I	E	.	.	.	.	.	.	.	G	V	A	N	L	Q	A	T	R	A	V	V	.	.	.	S	V	P	I
Query Conservation																.																															.	.								.	.	.	.	.	.	.													.	.	.
Alig confidence																.						.	.	.	.	.	.	.	.	.																	.	.								.	.	.	.	.	.	.													.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		V	A	S	K	L	L	R	L	M	Q	K	K	E	T	N	L	C	L	S	A	.	.	.	.	.	.	.	.	.	D	V	S	L	A	R	E	L	L	Q	L	A	D	A	L	G	P	S	I	C	M	L	K	T	H	V	D	I	L	N	D	F	T	L	D	V	M	K	E	L	I	T	L	A	K	C	H	E	F	L	I
Template Known Secondary structure														T								.	.	.	.	.	.	.	.	.			S													G	G	G		S						G	G	G		T	T																	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.													.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	.	.	.	.	.	.	.	.	.	.	.	.	P	E
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																								.	.
Template Sequence		F	E	D	R	K	F	A	D	I	G	N	T	V	K	K	.	.	Q	Y	E	G	G	I	F	K	I	A	S	W	A	D	L	V	N	A	H	V	V	P	G	.	.	S	G	V	V	K	G	L	Q	E	V	G	L	P	L	H	R	G	C	L	L	I	A	E	M	S	S	T	G	S	L	A	T	G	D	Y	T	R	A
Template Known Secondary structure									S								.	.					T	T	T		G	G	G	T		S						S	T	T		.	.	T											T	T	T	T										S	S	T	T					T
Template Predicted Secondary structure																	.	.																								.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	.	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I
Query Conservation																																																														.
Alig confidence																					.	.	.	.	.	.																																				.
Template Conservation																					.	.	.	.	.	.
Template Sequence		A	V	R	M	A	E	E	H	S	E	F	V	V	G	F	I	S	G	S	.	.	.	.	.	.	R	V	S	M	K	P	E	F	L	H	L	T	P	G	V	Q	L	E	A	G	G	D	N	L	G	Q	Q	Y	N	S	P	Q	E	V	I	G	K	R	G	S	D	I	I	I	V	G	R	G	I	I	S	A	A	D	R
Template Known Secondary structure								T	T	T	T	T							S	S	.	.	.	.	.	.						T	T	S						S	B		S	S	S		B		T	T	S		B		B							T	T	S			S					S					T	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.							.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
					217	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	C	Q	W	Y	N	T	A	M	K	K	A	V	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	E	A	A	E	M	Y	R	K	A	A	W	E	A	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions