Return to main results Retrieve Phyre Job Id

Job DescriptionP0A761
Confidence99.18%DateThu Jan 5 11:04:55 GMT 2012
Rank115Aligned Residues198
% Identity25%Templatec2nv2U_
PDB info PDB header:lyase/transferaseChain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10... ......20.........30.........40.........50.. .......60.....
Predicted Secondary structure  ..
















.................


Query SS confidence 








. .






































. . . . . . . . . . . . . . . . .












Query Sequence  AQLDQKIAA. . NGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRI. . . . . . . . . . . . . . . . . EGVANLQATRAVV
Query Conservation    
      .. 
  

  
    


 
   
   
  
   

  
  .................   
 
  

   
Alig confidence 








..







............


















.................












Template Conservation     
 
 
 
 







............ 
 


 


 


 





 





  





 

  
 

   
Template Sequence  ERVKRGMAEMQKGGVIMDV. . . . . . . . . . . . INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV
Template Known Secondary structure  TTTT
............SSTT
S
SS
T







Template Predicted Secondary structure 


............












Template SS confidence 















































































   7..10.........20..... ....30.........40.........50.........60.........70....
 
   66...70.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKL
Query Conservation    


   
       
        
     



 
 
                     

 

  
 
   
      
Alig confidence 













..........






















...





























Template Conservation 






 



 
..........










 










...   

 
  
 





   







 
Template Sequence  SIPVMAKARIGHIV. . . . . . . . . . EARVLEAMGVDYIDESEVLTPAD. . . EEFHLNKNEYTVPFVCGCRDLGEATRRIAE
Template Known Secondary structure  SS
TT
..........TT
STTS

S
...SS



GGG
SS
SST
Template Predicted Secondary structure 

..........










...













Template SS confidence 















































































   75....80........ .90.........100.........110. ........120.........130.........140.
 
   146...150.........160 .........170.........180.........190...
Predicted Secondary structure 









................................














Query SS confidence 














. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
































Query Sequence  GAEIIGTTLSGYTTP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQA
Query Conservation 
 
 
 
   
  
 ................................         
         



 


     
Alig confidence 














................................
































Template Conservation 

 












 


 
 
 
   

 
  
 


    
    





  

  





 











Template Sequence  GASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADA
Template Known Secondary structure  T
S


TTS

TS
GGGT

TS
SSB
S


S
Template Predicted Secondary structure 






















Template SS confidence 















































































   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   194.....200.........210.........220........
Predicted Secondary structure 







Query SS confidence 


































Query Sequence  ADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAV
Query Conservation        


 






     
   
    
 
 
Alig confidence 






















.










Template Conservation 






 











 

.   
 


 

Template Sequence  ALMMQLGADGVFVGSGIFKSDNP. AKFAKAIVEAT
Template Known Secondary structure  TT
S

TSS
.
Template Predicted Secondary structure 








.
Template SS confidence 


































   222.......230.........240.... .....250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions