Job Description P0A761 Confidence 87.13% Date Thu Jan 5 11:04:55 GMT 2012 Rank 430 Aligned Residues 127 % Identity 12% Template c2egwB_ PDB info PDB header:rna methyltransferase Chain: B: PDB Molecule:upf0088 protein aq_165; PDBTitle: crystal structure of rrna methyltransferase with sah ligand Resolution 2.80 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.											.
Query SS confidence																							.	.	.	.	.	.	.	.	.											.
Query Sequence		V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	.	.	.	.	.	.	.	.	.	P	V	P	V	E	T	L	L	A	R	.	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P
Query Conservation																							.	.	.	.	.	.	.	.	.											.
Alig confidence																							.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		V	R	Q	A	T	E	L	G	V	L	T	F	V	P	I	I	S	E	R	S	F	Q	K	E	E	A	I	L	K	K	T	E	K	W	K	R	I	V	I	E	A	M	K	Q	S	R	R	P	I	P	M	E	I	K	K	P	V	R	L	S	D	L	I	P	E	S	E	E	N	I	I	L	D	N	F	Y	E	G	V	K
Template Known Secondary structure								T	T										T	T	S																									T	T			S										G	G	G					S	S							S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	C	Q	W	Y	N	T	A	M
Query Conservation
Alig confidence								.	.	.	.	.	.																.
Template Conservation								.	.	.	.	.	.																.
Template Sequence		P	K	D	V	N	L	.	.	.	.	.	.	E	A	K	T	Y	S	V	V	V	G	P	E	G	G	F	.	S	K	R	E	S	Q	I	L	R	E	K	G	F	K	S	V	L	L	E	P	Y	T	L	R	T	E	T	A	V	V	S	I	V	S	I	L
Template Known Secondary structure		G	G	G	S		T	.	.	.	.	.	.	T		S									T	T			.											T	T							S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.																.
Template SS confidence
		170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions