Job Description P0A761 Confidence 88.74% Date Thu Jan 5 11:04:55 GMT 2012 Rank 415 Aligned Residues 108 % Identity 15% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																			.	.											.	.	.	.	.
Query SS confidence																							.																			.	.											.	.	.	.	.
Query Sequence		Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	.	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	.	.	G	L	L	A	M	T	D	C	S	T	.	.	.	.	.	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T
Query Conservation																							.																			.	.											.	.	.	.	.
Alig confidence																							.																			.	.											.	.	.	.	.
Template Conservation
Template Sequence		V	A	E	V	T	K	K	F	Y	S	M	G	C	Y	E	I	S	L	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	V	S	V	V	D	S	S	V	A	G	L	G
Template Known Secondary structure												T	T		S							T	T																			S		G	G	G						B		T	T	S												T	T							B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
							159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.	.	.						.
Template Conservation																											.	.	.	.						.
Template Sequence		G	C	P	Y	A	Q	G	A	S	G	N	L	A	T	E	D	L	V	Y	M	L	E	G	L	G	.	.	.	.	I	H	T	G	V	.	N	L	Q	K	L	L	E	A	G	N	F
Template Known Secondary structure				T	T	S	S	S				B		B											T	T	.	.	.	.		B				.
Template Predicted Secondary structure																											.	.	.	.						.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions