Job Description P0A761 Confidence 97.88% Date Thu Jan 5 11:04:55 GMT 2012 Rank 224 Aligned Residues 182 % Identity 12% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																				.	.	.	.	.
Query SS confidence																						.	.																				.	.	.	.	.
Query Sequence		S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	.	.	A	V	A	I	R	I	E	G	V	A	N	L	Q	A	T	R	A	V	V	.	.	.	.	.	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A	Q	A	G	A
Query Conservation																						.	.																				.	.	.	.	.
Alig confidence																						.	.								.												.	.	.	.	.
Template Conservation																															.
Template Sequence		D	E	N	G	T	E	D	D	I	R	E	L	C	N	E	S	V	K	T	C	P	F	A	A	A	V	C	V	Y	.	P	K	F	V	K	F	I	N	E	K	I	K	Q	E	I	N	P	F	K	P	K	I	A	C	V	I	N	F	P	Y	G	T	D	S	M	E	K	V	L	N	D	T	E	K	A	L	D	D	G	A
Template Known Secondary structure			T	T													T	T	S	S	S	S			S						.	G	G	G												S	S	S			S							S	T	T	T			S																T
Template Predicted Secondary structure																															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																									.	.							.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																									.	.							.	.	.	.	.
Query Sequence		D	I	I	A	I	D	G	T	D	R	.	.	.	.	.	.	.	.	.	.	.	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	.	.	S	T	P	E	D	G	.	.	.	.	.	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																									.	.							.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																									.	.							.	.	.	.	.														.
Template Conservation																																																																									.
Template Sequence		D	E	I	D	L	V	I	N	Y	K	K	I	I	E	N	T	D	E	G	L	K	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K	T	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I	K	T	.	S	T	G	K	V	Q	I	N
Template Known Secondary structure		S														S																			T	T	T	S													S													T	T	T		S					.			S		S	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180
		162	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		T	P	E	E	P	D	L	A	L	V	K	T	L	S	.	.	.	.	.	.	.	.	.	D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	.	.	.	G	A	W	A	V	T	V	G	S	A	I
Query Conservation																.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		A	T	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure																						G	G	G	T	T	T							S	S			S																					S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions