Job Description P0A761 Confidence 99.90% Date Thu Jan 5 11:04:55 GMT 2012 Rank 23 Aligned Residues 191 % Identity 26% Template c1znnF_ PDB info PDB header:biosynthetic protein Chain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		N	G	G	L	I	V	S	C	Q	P	V	P	D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	.	.	.	.	.	.	.	.	R	I	E	G	V	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																				.	.										.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																																													.	.										.	.	.	.	.
Template Sequence		K	G	G	V	I	M	D	V	.	.	.	.	.	.	.	.	.	.	.	.	V	N	A	E	Q	A	K	I	A	E	A	A	G	A	V	A	V	M	A	L	E	G	G	V	A	R	M	A	D	P	T	V	I	E	E	V	M	N	A	V	S	I	P	V	.	.	M	A	K	V	R	I	G	H	Y	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	S	S										T	T		S												S														S	S			.	.						T	T			.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																																													.	.										.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.													.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		A	Y	I	E	D	V	D	A	L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	.	.	.	.	.	D	C	S	T	P	E	D	G	L	A	C
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	E	A	R	V	L	E	A	L	G	V	D	Y	I	D	E	S	E	V	L	T	P	A	D	E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	D	L	G	E	A	A	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M
Template Known Secondary structure		.	.	.									T	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.															.							.	.
Query SS confidence																						.	.	.															.							.	.
Query Sequence		Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	.	.	.	P	E	E	P	D	L	A	L	V	K	T	L	S	D	.	A	G	C	R	V	I	.	.	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I
Query Conservation																						.	.	.															.							.	.
Alig confidence																						.	.	.															.							.	.
Template Conservation
Template Sequence		R	K	V	N	A	Q	I	R	K	V	V	N	M	S	E	D	E	L	V	A	E	A	K	Q	L	G	A	P	V	E	V	L	R	E	I	K	R	L	G	R	L	P	V	V	N	F	A	A	G	G	V	T	T	P	A	D	A	A	L	M	M	H	L	G	A	D	G	V	F	V	G	S	G	I	F	K	S	E	N	P
Template Known Secondary structure														S		G	G	G									T													T	S		S	S						S	S			S										T	T		S						T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		217	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	W	Y	N	T	A	M	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	Y	A	R	A	I	V	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions