Job Description P0A761 Confidence 99.69% Date Thu Jan 5 11:04:55 GMT 2012 Rank 78 Aligned Residues 169 % Identity 17% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.														.	.
Query SS confidence																													.	.	.	.	.	.	.	.														.	.
Query Sequence		D	S	P	L	D	K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	.	.	.	.	.	.	.	.	E	G	V	A	N	L	Q	A	T	R	A	V	V	.	.	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	V	R	I	T	A	Y	I	E	D	V	D	A	L	A
Query Conservation																													.	.	.	.	.	.	.	.														.	.
Alig confidence																			.										.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	.	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	I	A	L
Template Known Secondary structure				S		S													.	G	G	G		S							T	T	S															T	T			G	G	G					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T	P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S
Query Conservation
Alig confidence																.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		F	S	T	I	H	R	V	Q	L	P	S	G	S	F	.	.	.	.	.	.	S	P	K	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	.	.	.	.	.	.	.	.	R	G	V	S	L	L	S	D	I	K	Q
Template Known Secondary structure		T	T	T								T	T	S		.	.	.	.	.	.										T	T									S										T	T		S									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	R	H	G	A	W	A	V	T	V	G	S	A	I	T	R	L	E	H	I	.	.	.	C	Q	W	Y	N	T	A	M	K	K
Query Conservation																																											.	.	.
Alig confidence														.																													.	.	.
Template Conservation														.
Template Sequence		R	I	S	I	P	V	I	A	I	G	G	M	.	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E
Template Known Secondary structure					S						S	S		.		G	G	G							T	T		S					S					T	S	S	S
Template Predicted Secondary structure														.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions