Job Description P0A761 Confidence 92.02% Date Thu Jan 5 11:04:55 GMT 2012 Rank 381 Aligned Residues 189 % Identity 14% Template c1bwvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate Resolution 2.40 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		K	P	E	I	V	A	A	M	A	L	A	A	E	Q	A	G	A	V	A	I	R	I	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	Q	A	T	R	A	V	V	S	V	P	I	I	G	I	V	K	R	D	L	E	D	S	P	.	V	R	I	T	A	Y	I	E	D	V	D	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.							.
Template Conservation																																																										.	.	.	.	.
Template Sequence		S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V	K	G	.	.	.	.	.	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F
Template Known Secondary structure																	T		S	B				T	T		S	S	B	T	T	B																					T	S			B	.	.	.	.	.								S	S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	Q	A	G	A	D	I	I	A	I	D	G	T	D	R	P	R	P	V	P	V	E	T	L	L	A	R	I	H	H	H	G	L	L	A	M	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	S	T	P	E	D	G	L	A	C	Q	K	L	G	A	E	I	I	G	T	T	L	S	G	Y	T	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																	.	.																																																													.
Template Sequence		A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	.	.	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	.	G	K
Template Known Secondary structure					T	T		S						G	G	G	.	.															T	T								T	T	T					S		T	T	S															T		S							S	S	.	S	S
Template Predicted Secondary structure																	.	.																																																													.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Query Sequence		P	E	T	P	E	E	P	D	L	A	L	V	K	T	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	C	R	V	I	A	E	G	R	Y	N	T	P	A	Q	A	A	D	A	M	.	R	H	G	A	W	A	V	T	V	.	.	G	S	A	I	T	R	L	E	H	I
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.										.										.	.
Template Conservation																																																		.
Template Sequence		L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	.	H	A	G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	D	G	I
Template Known Secondary structure		S																	S					B	T	T	T	T	B		S					T	T										S	S		.		T	T	S										S	S						S					T		T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
					217	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	C	Q	W	Y	N	T	A	M	K	K	A	V
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Q	A	G	A	T	A	N	R	V	A	L	E	A	M	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions