Job Description Q46865 Confidence 3.93% Date Thu Jan 5 12:35:22 GMT 2012 Rank 64 Aligned Residues 39 % Identity 21% Template c2k6xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.															.	.	.
Query SS confidence															.	.															.	.	.
Query Sequence		S	Q	V	K	K	L	V	N	A	G	Q	V	R	.	.	T	T	R	S	A	L	L	N	A	D	E	L	G	L	.	.	.	D	F	D	G	M	C	N	V	I	I	G	L
Query Conservation															.	.															.	.	.
Alig confidence															.	.															.	.	.
Template Conservation
Template Sequence		R	R	I	K	K	L	I	S	L	G	K	K	K	G	Y	I	T	Y	E	D	I	D	K	A	F	P	P	D	F	E	G	F	D	T	N	L	I	E	R	I	H	E	E	L
Template Known Secondary structure															S	S		B									S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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