Job Description Q6BEX0 Confidence 96.95% Date Thu Jan 5 12:37:24 GMT 2012 Rank 161 Aligned Residues 147 % Identity 22% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	P	G	E	I	V	G	L	A	G	L	L	G	S	G	R	T	E	T	A	E	V	I	F	G	I	K	P	A	D	S	G	T	A	L	I	K	G	K	P	Q	N	L	R	S	P	H	Q	A	S	V	L	G	I	G	F	C	P	E	D	R	K	T	D	G	I	I	A	A	A	S	V	R	E	N	I	I	L	A
Query Conservation
Alig confidence																																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	M	G	G	V	A	A	F	I	D	A	E	H	A	.	L	D	P	V	Y	A	K	N	L	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T								S	T	T	S	S															T	T								S	S			.										T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	A	Q	R	G	W	L	R	P	I	S	R	K	E	Q	Q	E	I	A	E	R	F	I	R	Q	L	G	I	R	T	P	S	T	E	Q	P	I	E	F	L	S	G	G	N	Q	Q	K	V	L	L	S	R	W	L	L	T	R	P	Q	F	L	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	K	S	L	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	V	D	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M
Template Known Secondary structure		.	G	G	G							S	S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S							T	T	T								T	T
Template Predicted Secondary structure		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																															.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
			428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.																	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure		.																									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	E	P	T	R	G	I	D	V	G	A	H	A	E	I	I	R	L	I	E	T	L	C	A	D	.	G	L	A	L	L	V	I	S	S	E	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	G	Y	A	D	R	V	I	I	M	R	D	R	K	Q	V	A	E	I	P
Query Conservation		.																									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	M	Q	V	G	L	Q	A	R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V	V	I	F	T	N	Q	I	R	M	K	I	G	V	M	F	G	S	P	E	T	T	T	G	G	L	A	L	K	F	Y	A	T	M	R	M	E	V	R	R	G	E	P	I	K	E	G	K
Template Known Secondary structure			S	S		S	S																			T	S	S									S	S	S		S	S	S	S	S		S		S	S		T										S														T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions