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Job DescriptionQ6BEX0
Confidence100.00%DateThu Jan 5 12:37:24 GMT 2012
Rank43Aligned Residues278
% Identity19%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LRTEGLSKFF. . PGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIG
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Template Sequence  MTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQWRKA. FG
Template Known Secondary structure  SSTTS

TT

TTSSTT
S.TTSSSS
GGG.
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   88.90.........100.........110.........120.........130......... 140.........150......
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Query Sequence  TVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDV. . . . . . . . . . . REPLNRFSVAMQQIVAI
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Template Sequence  VIPQKVFIFSG. TFRKNLDPNAAHSD. . . . . . . . . . QEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCL
Template Known Secondary structure  S





SS.B
TTS
S
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TTTGGGSTTGGG
B

TTTTTS
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Query Sequence  CRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCEL. . . P
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Template Sequence  ARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ. . AFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELYHYP
Template Known Secondary structure  TT

SS
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SSGGGSTT
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   1357..1360.........1370.........1380.........1390 .........1400.........1410.........1420.........1430....
 
   234.....240... ......250.........260.........270........ .280
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Query Sequence  QIELVKMMLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAP. FD
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Template Sequence  ADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVILEGEVQ
Template Known Secondary structure  SBTTSSSS

TT
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Query Sequence  LEVRPGEIVGLAGLLGSGRTET
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Template Sequence  VVEQLGNETQIHIQIPSIRQNL
Template Known Secondary structure 
SS
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   1515....1520.........1530......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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