Job Description Q6BEX0 Confidence 100.00% Date Thu Jan 5 12:37:24 GMT 2012 Rank 4 Aligned Residues 446 % Identity 21% Template c3bk7A_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.									.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.									.
Query SS confidence												.	.	.	.	.	.	.	.									.
Query Sequence		H	Q	E	I	L	R	T	E	G	L	.	.	.	.	.	.	.	.	S	K	F	F	P	G	V	K	.	A	L	D	N	V	D	F	S	L	R	R	G	E	I	M	A	L	L	G	E	N	G	A	G	K	S	T	L	I	K	A	L	T	G	V	Y	H	A	D	R	G	T	I	W	L	E	G	Q	A	I	S	P	K
Query Conservation												.	.	.	.	.	.	.	.									.
Alig confidence												.	.	.	.	.	.	.	.									.								.
Template Conservation																																				.
Template Sequence		P	F	N	A	I	S	I	V	N	L	P	E	Q	L	D	E	D	C	V	H	R	Y	G	V	N	A	F	V	L	Y	R	L	P	I	.	V	K	D	G	M	V	V	G	I	V	G	P	N	G	T	G	K	T	T	A	V	K	I	L	A	G	Q	L	I	P	N	L	C	E	D	N	D	S	W	D	N	V	I	R	A
Template Known Secondary structure		S	S										T	T	G	G	G	S						S	T	T										.			T	T	S								T	T	S	S									T	T	S	S				T	T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
												77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	N	T	A	H	A	Q	Q	L	G	I	G	T	V	Y	Q	E	V	N	L	L	P	N	M	.	.	.	S	V	A	D	N	L	F	I	G	R	E	P	K	R	F	G	L	L	R	R	K	E	M	E	K	R	A	T	E	L	M	A	S	Y	G	F	S	L	D	V	R	E	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																								.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	G	N	E	L	Q	N	Y	F	E	R	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	L	P	K	A	V	K	G	K	V	R	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	K	K	V	D	E	V	G	K	F	E	E	V	V	K	E	L	E	L	E	N	V	L	D	R	E	L
Template Known Secondary structure		T	T	T	S	T											T	S								S		G	G	G	G	G	G	T			S	B						.	.	.	.	.	.	.	.	.	.	.	.			T			S	S									T	T		T	T	G	G	G	S	B	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	F	S	V	A	M	Q	Q	I	V	A	I	C	R	A	I	D	L	S	A	K	V	L	I	L	D	E	P	T	A	S	L	D	T	Q	E	V	E	L	L	F	D	L	M	R	Q	L	R	D	R	G	V	S	L	I	F	V	T	H	F	L	D	Q	V	Y	Q	V	S	D	R	I	T	V	L	R	N	G	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q	L	S	G	G	E	L	Q	R	V	A	I	A	A	A	L	L	R	K	A	H	F	Y	F	F	D	E	P	S	S	Y	L	D	I	R	Q	R	L	K	V	A	R	V	I	R	R	L	A	N	E	G	K	A	V	L	V	V	E	H	D	L	A	V	L	D	Y	L	S	D	V	I	H	V	V	Y	G	E	P	G
Template Known Secondary structure		G	G																	S			S							T	T	T	T																			T	T								S										S							S		T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.														.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	C	R	E	T	C	E	L	P	Q	I	E	L	V	K	M	M	L	G	R	E	L	D	T	H	A	L	Q	R	A	G	R	T	L	L	S	D	K	P	V	A	A	F	K	N	Y	G	K	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	A	P	F	D	L	E	V	R	P	G	E	I	V	G
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	G	I	F	S	K	P	K	G	T	R	N	G	I	N	E	F	L	Q	G	Y	L	K	D	E	N	V	R	F	R	P	Y	E	I	R	F	T	K	L	S	E	R	V	D	V	E	R	E	T	L	V	E	Y	P	R	L	V	K	D	Y	G	S	F	K	L	E	V	E	P	G	E	I	R	K	G	E	V	I	G
Template Known Secondary structure		T																				T			T	T	T	T					S	S							S	T	T	S																			S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	L	L	G	S	G	R	T	E	T	A	E	V	I	F	G	I	K	P	A	D	S	G	T	A	L	I	K	G	K	P	Q	N	L	R	S	P	H	Q	A	S	V	L	G	I	G	F	C	P	E	D	R	K	T	D	G	I	I	A	A	A	S	V	R	E	N	I	I	L	A	L	Q	A	Q	R	G	W	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																				.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																				.	.	.	.
Template Sequence		I	V	G	P	N	G	I	G	K	T	T	F	V	K	M	L	A	G	V	E	E	P	T	E	G	K	V	E	W	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Y	K	P	Q	Y	I	.	.	.	K	A	E	Y	E	G	T	V	Y	E	L	L	S	K	I	D	S	S	K	.	.	.	.
Template Known Secondary structure						T	T	S	S										T	S	S			S	B	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S		.	.	.					S	S	B													.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																				.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.															.	.	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	I	S	R	K	E	Q	Q	E	I	A	E	R	F	I	R	Q	L	G	I	R	T	P	S	T	E	Q	P	I	E	F	L	S	G	G	N	Q	Q	K	V	L	L	S	R	W	L	L	T	R	P	Q	F	L	I	L	D	E	P	T	R	G	I	D	V	G	A	H	A	E	I	I	R	L	I	E	T	L	C	A
Query Conservation
Alig confidence		.	.	.	.	.																		.
Template Conservation		.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	L	N	S	N	F	Y	K	T	E	L	L	K	P	L	G	I	I	.	D	L	Y	D	R	N	V	E	D	L	S	G	G	E	L	Q	R	V	A	I	A	A	T	L	L	R	D	A	D	I	Y	L	L	D	E	P	S	A	Y	L	D	V	E	Q	R	L	A	V	S	R	A	I	R	H	L	M	E
Template Known Secondary structure		.	.	.	.	.										T					T		T	.	T	T	T	T	S	B	G	G	G																T	S			S							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.																		.
Template SS confidence
							432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		451		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure			.																										.	.
Query SS confidence			.																										.	.
Query Sequence		D	.	G	L	A	L	L	V	I	S	S	E	L	E	E	L	V	G	Y	A	D	R	V	I	I	M	R	.	.	D	R	K	Q	V	A	E	I	P	L	A	E	L	S	V
Query Conservation			.																										.	.
Alig confidence			.																										.	.
Template Conservation
Template Sequence		K	N	E	K	T	A	L	V	V	E	H	D	V	L	M	I	D	Y	V	S	D	R	L	I	V	F	E	G	E	P	G	R	H	G	R	A	L	P	P	M	G	M	R	E
Template Known Secondary structure			T	T								S										S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.