Job Description Q6BEX0 Confidence 97.78% Date Thu Jan 5 12:37:24 GMT 2012 Rank 105 Aligned Residues 178 % Identity 14% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	V	D	F	S	L	R	R	G	E	I	M	A	L	L	G	E	N	G	A	G	K	S	T	L	I	K	A	L	T	G	V	Y	H	A	D	R	G	T	I	W	L	E	G	Q	A	I	S	P	K	N	T	A	H	A	Q	Q	L	G	I	G	T	V	Y	Q	E	V	N	L	L	P	N	M	S	V	A	D	N
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	R	M	T	Y	G	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	.	.	.	.	.	.	.	.	.	.	.	V	T	A	G	S	I	N	A	Q	K
Template Known Secondary structure							S	S	B		T	T									T	T	S	S														T	T	T								S	S	S											.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170								.	.	.	.	.
Predicted Secondary structure																																																													.	.								.	.	.	.	.	.	.
Query SS confidence																																																													.	.								.	.	.	.	.	.	.
Query Sequence		L	F	I	G	R	E	P	K	R	F	G	L	L	R	R	K	E	M	E	K	R	A	T	E	L	M	A	S	Y	G	F	S	L	D	V	R	E	P	L	N	R	F	S	V	A	M	Q	Q	I	V	A	I	C	R	A	I	D	L	S	.	.	A	K	V	L	I	L	D	.	.	.	.	.	.	.	E	P	T	A	S
Query Conservation																																																													.	.								.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																										.	.								.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		I	K	A	A	R	R	D	F	A	S	E	D	.	.	.	.	.	.	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D
Template Known Secondary structure				S							S	S		.	.	.	.	.	.													T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																				.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	T	Q	E	V	E	L	L	F	D	L	M	R	Q	L	.	R	D	R	G	V	S	L	I	F	V	T	H	F	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Y	Q	V	S	D	R	I	T	V	L	R
Query Conservation																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure																						T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions