Job Description Q6BEX0 Confidence 96.17% Date Thu Jan 5 12:37:24 GMT 2012 Rank 304 Aligned Residues 124 % Identity 15% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	D	F	S	L	R	R	G	E	I	M	A	L	L	G	E	N	G	A	G	K	S	T	L	I	K	A	L	T	G	V	Y	H	A	D	R	G	T	I	W	L	E	G	Q	A	I	S	P	K	N	T	A	H	A	Q	Q	L	G	I	G	T	V	Y	Q	E	V	N	L	L	P	N	M	S	V	A	D	N	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	F	I	T	T	D	T	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T	S				S		S	S	B							S	S	S																T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																				.	.	.	210	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		F	I	G	R	E	P	K	R	F	G	L	L	R	R	K	E	M	E	K	R	A	T	E	L	M	A	S	Y	G	F	S	L	D	V	R	E	P	L	N	R	F	S	V	A	M	Q	Q	I	V	A	I	C	R	A	I	D	L	S	A	K	V	L	I	L	D	E	P	T	.	A	S	L	D	T	Q	E	V	E	L	L
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	.	.	.	.	.	.	.	.	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F	V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T					T					T	T							S	S				.	.	.	.	.	.	.	.							T	T	T	T	S	S												S	S	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
															216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	L	M	R	Q	L	R	D	R	G	V	S	L	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L
Template Known Secondary structure					S				T	T	B
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions