Job Description Q6BEX0 Confidence 97.53% Date Thu Jan 5 12:37:24 GMT 2012 Rank 114 Aligned Residues 123 % Identity 17% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	G	E	I	M	A	L	L	G	E	N	G	A	G	K	S	T	L	I	K	A	L	T	G	V	Y	H	A	D	R	G	T	I	W	L	E	G	Q	A	I	S	P	K	N	T	A	H	A	Q	Q	L	G	I	G	T	V	Y	Q	E	V	N	L	L	P	N	M	S	V	A	D	N	L	F	I	G	R	E	P	K
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S							S	T	T	S	S														T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		R	F	G	L	L	R	R	K	E	M	E	K	R	A	T	E	L	M	A	S	Y	G	F	S	L	D	V	R	E	P	L	N	R	F	S	V	A	M	Q	Q	I	V	A	I	C	R	A	I	D	L	S	A	K	V	L	I	L	D	E	P	T	.	A	S	L	D	T	Q	E	V	E	L	L	F	D	L	M	R	Q	L
Query Conservation																																																															.
Alig confidence		.	.	.	.																																												.	.													.
Template Conservation		.	.	.	.																																												.	.
Template Sequence		.	.	.	.	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	.	.	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I
Template Known Secondary structure		.	.	.	.		S	S	T	T													T								T	T	S																.	.	T	T		S											T	T
Template Predicted Secondary structure		.	.	.	.																																												.	.
Template SS confidence
						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		192					.	.	.	.	.	.	.	200	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		R	.	.	.	.	D	R	G	V	S	L	I	F	V
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		A	K	A	D	P	E	E	P	K	E	V	W	L	V
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions