 |
Job Description | P33129 | Confidence | 16.41% | Date | Thu Jan 5 11:51:11 GMT 2012 |
Rank | 99 | Aligned Residues | 37 |
% Identity | 14% | Template | d2nn6i1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 3.35 |
|
  |   |
758 | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | V | P | R | Q | G | S | V | V | F | A | D | F | E | T | V | Q | G | Q | S | A | I | M | N | I | T | R | S | D | G | K | N | I | P | F | A |
Query Conservation |   |
  |
|   |
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
Q | L | L | P | D | V | G | A | I | V | T | C | K | V | S | S | I | N | S | R | F | A | K | V | H | I | L | Y | V | G | S | M | P | L | K | N | S |
Template Known Secondary structure |   |
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | S | S | S | S |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|