Return to main results Retrieve Phyre Job Id

Job DescriptionP33129
Confidence20.78%DateThu Jan 5 11:51:11 GMT 2012
Rank85Aligned Residues33
% Identity21%Templatec3gxxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   312.......320.........330.........340......
Predicted Secondary structure 















Query SS confidence 


































Query Sequence  PPGAFVIDDLSPSGYGSDLIVTIEESDGSKRTFSQ
Query Conservation 




 
 

    
 


 
 
 
  
      
Alig confidence 







..
























Template Conservation    
 



.. 
      
 



       
  
Template Sequence  ERGDFVIR. . QSSRGDDHLAITWKLDKDLFQHVDI
Template Known Secondary structure 
TT
..

STT

TT
Template Predicted Secondary structure 


..









Template SS confidence 


































   2930...... ...40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions