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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank98Aligned Residues239
% Identity18%Templated1cyda_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT. . NSDLVSLAKECPGI. . . . . . EPVCVDLGDWDATEKALGGIG
Template Known Secondary structure 

TT
STTSTT
S
..STT
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TT
TT

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   4.....10.........20.........30.........40 .........50.... .....60.........70.....
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA
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Template Sequence  PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA
Template Known Secondary structure 

S






B
GGG

TT



GGGTS

TTB
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH
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Template Sequence  MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI
Template Known Secondary structure  GGGT

BTTT

STTSS
B
SGGGTT

SS
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   286...290..
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Query Sequence  GVCGGEH
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Template Sequence  LVDAGYL
Template Known Secondary structure  STTGG
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   236...240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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