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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank99Aligned Residues241
% Identity29%Templatec3v8bC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  KALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD
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Template Sequence  VALITGAGSGIGRATALALAADGVTVGALGRT. . RTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLD
Template Known Secondary structure  STTSTT
SS..TTS


TT
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   7..10.........20.........30........ .40.........50.........60.........70.........80....
 
   131........140.........150.........160.........170........ .180.........190.........200......
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Query Sequence  IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG. . . . ASIITTSSIQAYQPSPHLLDYAATKAAI
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Template Sequence  IVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ
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TTTS
TTT


SBTTTB

STT
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   207..210.........220.........230.........240.........250.... .....260.........270.........
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Query Sequence  LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT. . . . . . . PMKRAGQPAELAPVYVYLASQESSY
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Template Sequence  VAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH
Template Known Secondary structure  GGGTS
BSS
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B
TSGGGTT
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   280.........290...
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Query Sequence  VTAEVHGVCGGEHL
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Template Sequence  VTGSPVWIDGGQGL
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   245....250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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