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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank115Aligned Residues231
% Identity22%Templatec3un1D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:probable oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from sinorhizobium meliloti2 1021
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS. . . . . . . . . . . ADPDIHTVAGDISKPETADRIVREGIER
Template Known Secondary structure 

SSSS
SSTTSS



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TT

TTS
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   1........10.........20.........30.........40. ........50.........60.........
 
   126...130.........140.........150.........160.........170... ......180.........190..... ....200..
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP. LLPKGASIITTSSIQAYQPSPH. . LLDYAAT
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Template Sequence  FGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLT
Template Known Secondary structure  S











GGG

TTT


TTTTS

TT


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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   203......210.........220.........230.........240.........250.........260.........270.........280..
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Query Sequence  KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA
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Template Sequence  KGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXH. . . . . PAETHSTLAGLHPVGRXGEIRDVVDAVLYL. . EHAGFITG
Template Known Secondary structure  TTTTT

B

TTS.....
GGGTTSTTS

B
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S
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   150.........160.........170.........180.... .....190.........200.........210.... .....220..
 
   283......290....
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Query Sequence  EVHGVCGGEHLG
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Template Sequence  EILHVDGGQNAG
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   223......230....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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