Job Description P0AG84 Confidence 99.95% Date Wed Jan 25 15:20:34 GMT 2012 Rank 179 Aligned Residues 211 % Identity 24% Template c3tjrA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a rv0851c ortholog short chain dehydrogenase from2 mycobacterium paratuberculosis Resolution 1.60 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	L	K	D	R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	A	D	V	A	I	S	Y	L	P	V	E	E	E	D	A	Q	D	V	K	K	I	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	K	F	A	R	S	L	V	H	E	A	H
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		L	S	G	F	D	G	R	A	A	V	V	T	G	G	A	S	G	I	G	L	A	T	A	T	E	F	A	R	R	G	A	R	L	V	L	S	D	V	D	.	.	Q	P	A	L	E	Q	A	V	N	G	L	R	G	Q	G	F	D	A	H	G	V	V	C	D	V	R	H	L	D	E	M	V	R	L	A	D	E	A	F
Template Known Secondary structure					S	T	T							T	T	T	S													T	T								S		.	.														T	T										T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		K	A	L	G	G	L	D	I	M	A	L	V	A	G	K	Q	V	A	I	P	D	I	A	D	L	T	S	E	Q	F	Q	K	T	F	A	I	N	V	F	A	L	F	W	L	T	Q	E	A	I	P	.	.	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A
Query Conservation																																																				.	.
Alig confidence																																																				.	.
Template Conservation
Template Sequence		R	L	L	G	G	V	D	V	V	F	S	N	A	G	I	V	V	A	G	P	L	A	Q	M	N	H	D	D	W	R	W	V	I	D	I	D	L	W	G	S	I	H	A	V	E	A	F	L	P	R	L	L	E	Q	G	T	G	G	H	I	A	F	T	A	S	F	A	G	L	V	P	N	A	G	L	G	T	Y	G	V
Template Known Secondary structure					S	S		S												B		G	G	G														T																			S										G	G	G	T	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	A	I	L	N	Y	S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	Y	G	V	V	G	L	A	E	T	L	A	R	E	V	K	P	N	G	I	G	V	S	V	L	C	P	M	V	V	E	T	K	L	V	S	N	S	E	R	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	S	A	D	D	V	A	R	L	T	A
Template Known Secondary structure																		G	G	G	T									S				S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.															.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions