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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank21Aligned Residues248
% Identity27%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH
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Template Sequence  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELS. SVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV
Template Known Secondary structure  TT

TT
TTTTSTT
SSGGGG.TTSSSS


TT
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   14.....20.........30.........40.........50....... ..60.........70.........80.........90..
 
   124.....130.........140.........150.........160.........170. ........180.........190.........200.
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Query Sequence  KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEA. . IPLLPKGASIITTSSIQAYQPSPHLLDYAA
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Template Sequence  DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGA
Template Known Secondary structure  S











TTT

TTSS


SBTTTB

TT
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT
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Template Sequence  SKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG. . EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT
Template Known Secondary structure  GGGT

SB

TT
..TT
TTSS
B
SGGGTT

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   173......180.........190.........200.........210.. .......220.........230.........240.........250
 
   282.......290....
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Query Sequence  AEVHGVCGGEHLG
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Template Sequence  GQAIVVDGGQVLP
Template Known Secondary structure  S
STTTT

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   251........260...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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