Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG84
Confidence99.32%DateWed Jan 25 15:20:34 GMT 2012
Rank212Aligned Residues209
% Identity13%Templatec3rfxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL
Query Conservation 












 


  
   

 


  
                          
                     
Alig confidence 




































...........















......









Template Conservation 
 







 

  
   
   
  
    
     ...........          

 
  ......          
Template Sequence  KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP. . . . . . . . . . . AGPNEECVQCDLADAN. . . . . . AVNAMVAGCD
Template Known Secondary structure  STTSTGGGSS



...........

TT

TT
......TT
S
Template Predicted Secondary structure 













...........









......




Template SS confidence 















































































   4.....10.........20.........30.........40 .........50...... ...60......
 
   130.........140.........150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNY
Query Conservation                                                     

  

            
 


 
    
Alig confidence 















































































Template Conservation   
                                         
               
     
   
  

   
  
Template Sequence  GIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLAGVSKCFGENL
Template Known Secondary structure 

S

S


TTT

GGGGTTSBTTS
B
TT





S
Template Predicted Secondary structure 

































Template SS confidence 















































































   67..70.........80.........90.........100.........110.........120.........130.........140......
 
   210.........220.........230.........240.........250.........260.........270.........280.........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  SRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG
Query Conservation     

 
    




 
 

 
 
                    

 
   




  
 

 

 
  


  
 


Alig confidence 







...























..............














..













Template Conservation          ...

    

   
 
          .............. 
   
 
      
..              
Template Sequence  ARMYFDKF. . . GQETALVRIGSCTPEPNNYRMLST. . . . . . . . . . . . . . WFSHDDFVSLIEAVF. . RAPVLGCPVVWGAS
Template Known Secondary structure  ...



B
SSS

STT..............B

..
S


S


Template Predicted Secondary structure  ...














..............


..







Template SS confidence 















































































   147..150.... .....160.........170........ .180.........190... ......200.......
 
   290....
Predicted Secondary structure 




Query SS confidence 




Query Sequence  GEHLG
Query Conservation 
  
 
Alig confidence 




Template Conservation       
Template Sequence  ANDAG
Template Known Secondary structure 

TT
Template Predicted Secondary structure 



Template SS confidence 




   208.210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions