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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank91Aligned Residues235
% Identity31%Templatec3r1iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH. . SDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE
Template Known Secondary structure 

TT
SSTTSTT
SS..GGGGTT




TT
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   8.10.........20.........30.........40.... .....50.........60.........70.........80.....
 
   126...130..... ....140.........150.........160.........170.........180.........190..... ....200.
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Query Sequence  LGGLDIMALV. . AGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH. . LLDYAA
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Template Sequence  LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT
Template Known Secondary structure  S

S








GGG

TTS


GGGTS


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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT
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Template Sequence  SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTYH. . . . . . . . . . . ALWEPKIPLGRMGRPEELTGLYLYLASAASSYMT
Template Known Secondary structure  GGGT

B


...........GGGSTTSS
B
GGGTSGGGTT

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   166...170.........180.........190.........200 .........210.........220.........230....
 
   282.......290...
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Query Sequence  AEVHGVCGGEHL
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Template Sequence  GSDIVIDGGYTC
Template Known Secondary structure  S
STTTT
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   243......250....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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