Job Description P0AG84 Confidence 99.49% Date Wed Jan 25 15:20:34 GMT 2012 Rank 209 Aligned Residues 217 % Identity 14% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																													.																.	.
Query SS confidence																													.																.	.
Query Sequence		L	K	D	R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	.	A	D	V	A	I	S	Y	L	P	V	E	E	E	D	A	.	.	Q	D	V	K	K	I	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	K	F	A	R	S	L	V	H	E	A	H
Query Conservation																													.																.	.
Alig confidence																													.																.	.																												.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		V	S	Q	S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	.	.	.	.	.	A	F	I
Template Known Secondary structure				T							T	T	T	S												T	T			S							S																				S	S									T	T	S					.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	G	G	L	D	I	M	A	L	V	A	G	K	Q	V	A	I	P	D	I	A	D	L	T	S	E	Q	F	Q	K	T	F	A	I	N	V	F	A	L	F	W	L	T	Q	E	A	I	P	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A	T	K
Query Conservation
Alig confidence																					.	.	.																														.	.																.	.	.
Template Conservation																					.	.	.																														.	.																.	.	.
Template Sequence		K	A	D	G	Q	Y	D	Y	V	L	N	L	S	A	L	K	H	V	R	.	.	.	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	.	.	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	.	.	.	P	V	N	X	X	G	A	S	K
Template Known Secondary structure								S											G	G	.	.	.	G	G	S	S												T													T	.	.	T		S								S		S	S		.	.	.			S
Template Predicted Secondary structure																					.	.	.																														.	.																.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	L	N	Y	S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V	Y	L	A	S	Q	E	S	S	Y	V	T	A	E
Query Conservation
Alig confidence																											.															.	.	.	.	.	.	.	.	.	.	.	.	.															.									.	.
Template Conservation																											.															.	.	.	.	.	.	.	.	.	.	.	.	.															.									.	.
Template Sequence		R	I	X	E	X	F	L	X	R	K	S	E	E	I	A	I	S	T	A	R	F	A	N	V	A	.	F	S	D	G	S	R	I	Q	K	N	Q	P	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	.	X	S	C	I	F	G	E	N	.	.	R	D
Template Known Secondary structure												T	T	T	S										B	T	.	T		T	T			T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.				B											.								T	.	.	T
Template Predicted Secondary structure																											.															.	.	.	.	.	.	.	.	.	.	.	.	.															.									.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.														.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.			.	.
		284	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	G	V	C	G	G	E	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	F	P	K	D	X	A	R	F
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions